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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2367360 |
| Transcript ID | Lj4g3v2367360.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein ALWAYS EARLY 3-like [Glycine max] gi|356563900|ref|XP_003550195.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 40 | 40 | – | – | |
| PANTHER | 2 | 1160 | 1159 | 0 | – | |
| PANTHER | 2 | 1160 | 1159 | 0 | ||
| SMART | 52 | 100 | 49 | 0.0076 | ||
| SUPERFAMILY | 52 | 99 | 48 | 8.22E-10 | ||
| Gene3D | 55 | 90 | 36 | 6.50E-05 | ||
| Pfam | 55 | 90 | 36 | 4.30E-08 | ||
| CDD | 56 | 90 | 35 | 1.18E-06 | – | |
| MobiDBLite | 126 | 174 | 49 | – | – | |
| MobiDBLite | 243 | 329 | 87 | – | – | |
| MobiDBLite | 420 | 556 | 137 | – | – | |
| Pfam | 625 | 725 | 101 | 3.30E-31 | ||
| SMART | 625 | 726 | 102 | 6.50E-48 | ||
| Coils | 677 | 697 | 21 | – | – | |
| Coils | 877 | 897 | 21 | – | – | |
| Coils | 1014 | 1034 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Cellular component | Transcriptional repressor complex | A protein complex that possesses activity that prevents or downregulates transcription. |
Expression pattern of Lj4g3v2367360.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2367360.1, powered by CORGI.
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