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Lj4g3v2374840.2

Overview

Field Value
Gene ID Lj4g3v2374840
Transcript ID Lj4g3v2374840.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description DnaJ homolog subfamily B member [Medicago truncatula] gi|357478569|ref|XP_003609570.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24078:SF224
10 112 103 1.00E-74 –
PANTHER
PTHR24078
10 112 103 1.00E-74 –
Gene3D
G3DSA:1.10.287.110
11 111 101 2.00E-16
IPR001623
SUPERFAMILY
SSF46565
59 111 53 1.83E-15
IPR001623
SMART
SM00271
66 112 47 9.60E-09
IPR001623
ProSiteProfiles
PS50076
67 112 46 11.974
IPR001623
CDD
cd06257
67 111 45 1.83E-15
IPR001623
Pfam
PF00226
67 111 45 6.80E-15
IPR001623
PRINTS
PR00625
69 87 19 1.70E-08
IPR001623
PRINTS
PR00625
87 102 16 1.70E-08
IPR001623
PRINTS
PR00625
103 112 10 1.70E-08
IPR001623

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj4g3v2374840.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2374840.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.