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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2374950 |
| Transcript ID | Lj4g3v2374950.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transporter ERD6-like 16-like [Cicer arietinum] gi|502151198|ref|XP_004508324.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | – | – | |
| ProSiteProfiles | 1 | 164 | 164 | 14.546 | ||
| PANTHER | 1 | 157 | 157 | 6.50E-107 | – | |
| PANTHER | 1 | 157 | 157 | 6.50E-107 | – | |
| Pfam | 2 | 155 | 154 | 4.10E-34 | ||
| Gene3D | 3 | 154 | 152 | 5.90E-11 | – | |
| SUPERFAMILY | 3 | 155 | 153 | 3.66E-14 | ||
| PRINTS | 4 | 14 | 11 | 1.70E-11 | ||
| TMHMM | 20 | 42 | 23 | – | – | |
| Phobius | 33 | 50 | 18 | – | – | |
| Phobius | 51 | 56 | 6 | – | – | |
| TMHMM | 57 | 79 | 23 | – | – | |
| Phobius | 57 | 79 | 23 | – | – | |
| Phobius | 80 | 90 | 11 | – | – | |
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 91 | 115 | 25 | – | – | |
| PRINTS | 94 | 115 | 22 | 1.70E-11 | ||
| Phobius | 116 | 126 | 11 | – | – | |
| PRINTS | 117 | 129 | 13 | 1.70E-11 | ||
| Phobius | 127 | 147 | 21 | – | – | |
| TMHMM | 128 | 150 | 23 | – | – | |
| Phobius | 148 | 164 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v2374950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2374950.1, powered by CORGI.
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