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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2478460 |
| Transcript ID | Lj4g3v2478460.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable inositol transporter 2-like [Glycine max] gi|356556509|ref|XP_003546567.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 281 | 281 | 7.50E-217 | – | |
| Gene3D | 1 | 129 | 129 | 6.00E-24 | – | |
| PANTHER | 1 | 281 | 281 | 7.50E-217 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| SUPERFAMILY | 1 | 271 | 271 | 1.11E-60 | ||
| CDD | 1 | 445 | 445 | 6.01E-24 | ||
| ProSiteProfiles | 1 | 449 | 449 | 45.959 | ||
| Pfam | 2 | 273 | 272 | 4.20E-77 | ||
| TIGRFAM | 2 | 276 | 275 | 1.50E-73 | ||
| TMHMM | 12 | 29 | 18 | – | – | |
| Phobius | 12 | 29 | 18 | – | – | |
| Phobius | 30 | 34 | 5 | – | – | |
| TMHMM | 34 | 56 | 23 | – | – | |
| Phobius | 35 | 56 | 22 | – | – | |
| PRINTS | 35 | 54 | 20 | 4.70E-20 | ||
| ProSitePatterns | 40 | 65 | 26 | – | ||
| Phobius | 57 | 67 | 11 | – | – | |
| Phobius | 68 | 91 | 24 | – | – | |
| TMHMM | 69 | 91 | 23 | – | – | |
| Phobius | 92 | 96 | 5 | – | – | |
| TMHMM | 96 | 118 | 23 | – | – | |
| Phobius | 97 | 118 | 22 | – | – | |
| Phobius | 119 | 183 | 65 | – | – | |
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 184 | 205 | 22 | – | – | |
| Gene3D | 187 | 273 | 87 | 3.90E-24 | – | |
| PRINTS | 194 | 204 | 11 | 4.70E-20 | ||
| Phobius | 206 | 219 | 14 | – | – | |
| Phobius | 220 | 244 | 25 | – | – | |
| TMHMM | 220 | 242 | 23 | – | – | |
| Phobius | 245 | 250 | 6 | – | – | |
| TMHMM | 251 | 273 | 23 | – | – | |
| Phobius | 251 | 270 | 20 | – | – | |
| Phobius | 271 | 356 | 86 | – | – | |
| PANTHER | 348 | 462 | 115 | 7.50E-217 | – | |
| PANTHER | 348 | 462 | 115 | 7.50E-217 | – | |
| Pfam | 354 | 459 | 106 | 1.50E-26 | ||
| SUPERFAMILY | 355 | 457 | 103 | 1.11E-60 | ||
| Gene3D | 355 | 457 | 103 | 3.90E-24 | – | |
| Phobius | 357 | 382 | 26 | – | – | |
| TMHMM | 360 | 382 | 23 | – | – | |
| PRINTS | 361 | 382 | 22 | 4.70E-20 | ||
| Phobius | 383 | 393 | 11 | – | – | |
| PRINTS | 384 | 396 | 13 | 4.70E-20 | ||
| TMHMM | 389 | 411 | 23 | – | – | |
| Phobius | 394 | 415 | 22 | – | – | |
| Phobius | 416 | 420 | 5 | – | – | |
| Phobius | 421 | 445 | 25 | – | – | |
| TMHMM | 421 | 443 | 23 | – | – | |
| Phobius | 446 | 471 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v2478460.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2478460.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.