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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2478470 |
| Transcript ID | Lj4g3v2478470.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable inositol transporter 2-like [Glycine max] gi|356556509|ref|XP_003546567.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | – | – | |
| PANTHER | 1 | 370 | 370 | 1.50E-284 | – | |
| PANTHER | 1 | 370 | 370 | 1.50E-284 | – | |
| SUPERFAMILY | 18 | 371 | 354 | 1.44E-72 | ||
| TIGRFAM | 20 | 392 | 373 | 9.70E-93 | ||
| Gene3D | 28 | 221 | 194 | 6.00E-29 | – | |
| ProSiteProfiles | 29 | 541 | 513 | 53.744 | ||
| Phobius | 29 | 54 | 26 | – | – | |
| TMHMM | 29 | 51 | 23 | – | – | |
| Pfam | 30 | 372 | 343 | 1.70E-91 | ||
| CDD | 31 | 359 | 329 | 1.00E-28 | ||
| PRINTS | 37 | 47 | 11 | 1.40E-25 | ||
| Phobius | 55 | 65 | 11 | – | – | |
| Phobius | 66 | 85 | 20 | – | – | |
| TMHMM | 66 | 88 | 23 | – | – | |
| Phobius | 86 | 96 | 11 | – | – | |
| Phobius | 97 | 117 | 21 | – | – | |
| TMHMM | 97 | 116 | 20 | – | – | |
| Phobius | 118 | 122 | 5 | – | – | |
| TMHMM | 122 | 144 | 23 | – | – | |
| Phobius | 123 | 144 | 22 | – | – | |
| PRINTS | 123 | 142 | 20 | 1.40E-25 | ||
| ProSitePatterns | 128 | 153 | 26 | – | ||
| Phobius | 145 | 155 | 11 | – | – | |
| Phobius | 156 | 178 | 23 | – | – | |
| TMHMM | 157 | 179 | 23 | – | – | |
| Phobius | 179 | 183 | 5 | – | – | |
| TMHMM | 184 | 206 | 23 | – | – | |
| Phobius | 184 | 206 | 23 | – | – | |
| Phobius | 207 | 272 | 66 | – | – | |
| TMHMM | 272 | 294 | 23 | – | – | |
| Phobius | 273 | 295 | 23 | – | – | |
| Gene3D | 274 | 362 | 89 | 1.60E-23 | – | |
| PRINTS | 283 | 293 | 11 | 1.40E-25 | ||
| Phobius | 296 | 309 | 14 | – | – | |
| TMHMM | 309 | 331 | 23 | – | – | |
| Phobius | 310 | 333 | 24 | – | – | |
| Phobius | 334 | 339 | 6 | – | – | |
| Phobius | 340 | 359 | 20 | – | – | |
| TMHMM | 340 | 359 | 20 | – | – | |
| Phobius | 360 | 447 | 88 | – | – | |
| PANTHER | 440 | 566 | 127 | 1.50E-284 | – | |
| PANTHER | 440 | 566 | 127 | 1.50E-284 | – | |
| Gene3D | 446 | 549 | 104 | 1.60E-23 | – | |
| Pfam | 448 | 551 | 104 | 1.20E-25 | ||
| Phobius | 448 | 474 | 27 | – | – | |
| TMHMM | 452 | 474 | 23 | – | – | |
| PRINTS | 453 | 474 | 22 | 1.40E-25 | ||
| SUPERFAMILY | 454 | 549 | 96 | 1.44E-72 | ||
| Phobius | 475 | 485 | 11 | – | – | |
| PRINTS | 476 | 488 | 13 | 1.40E-25 | ||
| TMHMM | 481 | 503 | 23 | – | – | |
| Phobius | 486 | 507 | 22 | – | – | |
| Phobius | 508 | 512 | 5 | – | – | |
| Phobius | 513 | 537 | 25 | – | – | |
| TMHMM | 513 | 535 | 23 | – | – | |
| Phobius | 538 | 571 | 34 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v2478470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2478470.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.