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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2478500 |
| Transcript ID | Lj4g3v2478500.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable inositol transporter 2-like [Glycine max] gi|356510859|ref|XP_003524151.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | – | – | |
| PANTHER | 1 | 375 | 375 | 6.40E-291 | – | |
| PANTHER | 1 | 375 | 375 | 6.40E-291 | – | |
| SUPERFAMILY | 19 | 365 | 347 | 2.49E-69 | ||
| TIGRFAM | 20 | 370 | 351 | 2.80E-92 | ||
| Gene3D | 28 | 219 | 192 | 3.50E-25 | – | |
| ProSiteProfiles | 29 | 545 | 517 | 55.509 | ||
| Phobius | 29 | 54 | 26 | – | – | |
| Pfam | 30 | 370 | 341 | 1.30E-92 | ||
| TMHMM | 30 | 52 | 23 | – | – | |
| CDD | 31 | 541 | 511 | 6.59E-29 | ||
| PRINTS | 37 | 47 | 11 | 2.50E-27 | ||
| Phobius | 55 | 65 | 11 | – | – | |
| Phobius | 66 | 86 | 21 | – | – | |
| TMHMM | 67 | 89 | 23 | – | – | |
| Phobius | 87 | 97 | 11 | – | – | |
| TMHMM | 98 | 117 | 20 | – | – | |
| Phobius | 98 | 117 | 20 | – | – | |
| Phobius | 118 | 122 | 5 | – | – | |
| TMHMM | 122 | 144 | 23 | – | – | |
| Phobius | 123 | 144 | 22 | – | – | |
| PRINTS | 123 | 142 | 20 | 2.50E-27 | ||
| ProSitePatterns | 128 | 153 | 26 | – | ||
| Phobius | 145 | 155 | 11 | – | – | |
| Phobius | 156 | 178 | 23 | – | – | |
| TMHMM | 157 | 179 | 23 | – | – | |
| Phobius | 179 | 183 | 5 | – | – | |
| TMHMM | 184 | 206 | 23 | – | – | |
| Phobius | 184 | 206 | 23 | – | – | |
| Phobius | 207 | 276 | 70 | – | – | |
| Phobius | 277 | 300 | 24 | – | – | |
| TMHMM | 277 | 299 | 23 | – | – | |
| Gene3D | 281 | 367 | 87 | 6.20E-24 | – | |
| PRINTS | 288 | 298 | 11 | 2.50E-27 | ||
| Phobius | 301 | 314 | 14 | – | – | |
| TMHMM | 314 | 336 | 23 | – | – | |
| Phobius | 315 | 338 | 24 | – | – | |
| Phobius | 339 | 344 | 6 | – | – | |
| Phobius | 345 | 364 | 20 | – | – | |
| TMHMM | 345 | 367 | 23 | – | – | |
| Phobius | 365 | 452 | 88 | – | – | |
| PANTHER | 444 | 576 | 133 | 6.40E-291 | – | |
| PANTHER | 444 | 576 | 133 | 6.40E-291 | – | |
| Pfam | 449 | 555 | 107 | 2.60E-26 | ||
| Gene3D | 451 | 553 | 103 | 6.20E-24 | – | |
| SUPERFAMILY | 451 | 553 | 103 | 2.49E-69 | ||
| Phobius | 453 | 478 | 26 | – | – | |
| TMHMM | 456 | 478 | 23 | – | – | |
| PRINTS | 457 | 478 | 22 | 2.50E-27 | ||
| Phobius | 479 | 489 | 11 | – | – | |
| PRINTS | 480 | 492 | 13 | 2.50E-27 | ||
| Phobius | 490 | 511 | 22 | – | – | |
| Phobius | 512 | 522 | 11 | – | – | |
| TMHMM | 517 | 539 | 23 | – | – | |
| Phobius | 523 | 541 | 19 | – | – | |
| Phobius | 542 | 584 | 43 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v2478500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2478500.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.