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Lj4g3v2604250.1

Overview

Field Value
Gene ID Lj4g3v2604250
Transcript ID Lj4g3v2604250.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cicer arietinum] gi|502140733|ref|XP_004504315.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP
SignalP-TM_GRAM_POSITIVE
1 10 10 – –
PANTHER
PTHR17224:SF4
11 212 202 7.90E-148 –
Gene3D
G3DSA:3.40.50.1470
11 203 193 6.30E-71
IPR001328
PANTHER
PTHR17224
11 212 202 7.90E-148
IPR001328
Hamap
MF_00083
17 195 179 30.912
IPR001328
SUPERFAMILY
SSF53178
17 202 186 1.44E-59
IPR001328
Pfam
PF01195
19 201 183 3.50E-50
IPR001328
TIGRFAM
TIGR00447
19 202 184 1.00E-54
IPR001328
ProSitePatterns
PS01195
30 43 14 –
IPR018171

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004045
Molecular function Aminoacyl-tRNA hydrolase activity Catalysis of the reaction: N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA.
Subterm of

Genome browser

LORE1 insertions 22

Expression data

Expression pattern

Expression pattern of Lj4g3v2604250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2604250.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.