Domain Predictions — View

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PF01195

Source: Pfam

Description

Peptidyl-tRNA hydrolase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004045 View details of GO:0004045 AmiGO InterPro QuickGO	Molecular function	Aminoacyl-tRNA hydrolase activity	Catalysis of the reaction: N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA.	Subterm of GO:0052689 GO:0140101

Associated Lotus transcripts 9

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0191739.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Cicer arietinum] gi\|502138474\|ref\|XP_004503420.1\|	Domains G3DSA:3.40.50.1470 IPR001328 IPR018171 MF_00083 NON_CYTOPLASMIC_DOMAIN PF01195 PS01196 PTHR17224 PTHR17224:SF5 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53178 SignalP-TM_GRAM_POSITIVE TIGR00447	16
Lj1g3v3300020.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like isoform X1 [Cicer arietinum] gi\|502106461\|ref\|XP_004492950.1\|	Domains G3DSA:3.40.50.1470 IPR001328 MF_00083 PF01195 PTHR17224 PTHR17224:SF3 SSF53178 TIGR00447	8
Lj4g3v2604250.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cicer arietinum] gi\|502140733\|ref\|XP_004504315.1\|	Domains G3DSA:3.40.50.1470 IPR001328 IPR018171 MF_00083 PF01195 PS01195 PTHR17224 PTHR17224:SF4 SSF53178 SignalP-TM_GRAM_POSITIVE TIGR00447	11
Lj4g3v3098140.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Cicer arietinum] gi\|502138474\|ref\|XP_004503420.1\|	Domains G3DSA:3.40.50.1470 IPR001328 IPR018171 MF_00083 NON_CYTOPLASMIC_DOMAIN PF01195 PS01195 PS01196 PTHR17224 PTHR17224:SF5 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53178 SignalP-TM_GRAM_POSITIVE TIGR00447	17
LotjaGi1g1v0548200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peptidyl-tRNA hydrolase family protein; TAIR: AT5G16140.1 Peptidyl-tRNA hydrolase family protein; Swiss-Prot: sp\|Q9LF14\|CRS2B_ARATH Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic; TrEMBL-Plants: tr\|I3SEB0\|I3SEB0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0548200	Domains G3DSA:3.40.50.1470 IPR001328 IPR018171 IPR036416 MF_00083 PF01195 PS01195 PS01196 PTHR17224 PTHR17224:SF3 SSF53178 TIGR00447	12
LotjaGi1g1v0548200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peptidyl-tRNA hydrolase family protein; TAIR: AT5G16140.1 Peptidyl-tRNA hydrolase family protein; Swiss-Prot: sp\|Q9LF14\|CRS2B_ARATH Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic; TrEMBL-Plants: tr\|I3SEB0\|I3SEB0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0548200	Domains G3DSA:3.40.50.1470 IPR001328 IPR018171 IPR036416 MF_00083 PF01195 PS01195 PS01196 PTHR17224 PTHR17224:SF3 SSF53178 TIGR00447	12
LotjaGi4g1v0350500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peptidyl-tRNA hydrolase family protein; TAIR: AT1G18440.1 Peptidyl-tRNA hydrolase family protein; Swiss-Prot: sp\|Q8GW64\|PTHC_ARATH Peptidyl-tRNA hydrolase, chloroplastic; TrEMBL-Plants: tr\|G7L906\|G7L906_MEDTR Peptidyl-tRNA hydrolase family protein; Found in the gene: LotjaGi4g1v0350500	Domains G3DSA:3.40.50.1470 IPR001328 IPR018171 IPR036416 MF_00083 PF01195 PS01195 PS01196 PTHR17224 PTHR17224:SF6 SSF53178 SignalP-TM TIGR00447	13
LotjaGi4g1v0376500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peptidyl-tRNA hydrolase family protein; TAIR: AT5G19830.1 Peptidyl-tRNA hydrolase family protein; Swiss-Prot: sp\|Q6NLS8\|PTHM_ARATH Peptidyl-tRNA hydrolase, mitochondrial; TrEMBL-Plants: tr\|V7CMJ9\|V7CMJ9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0376500	Domains G3DSA:3.40.50.1470 IPR001328 IPR018171 IPR036416 MF_00083 PF01195 PS01195 PTHR17224 PTHR17224:SF4 SSF53178 SignalP-TM TIGR00447	12
LotjaGi4g1v0451600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peptidyl-tRNA hydrolase family protein; TAIR: AT1G18440.1 Peptidyl-tRNA hydrolase family protein; Swiss-Prot: sp\|Q8GW64\|PTHC_ARATH Peptidyl-tRNA hydrolase, chloroplastic; TrEMBL-Plants: tr\|G7L906\|G7L906_MEDTR Peptidyl-tRNA hydrolase family protein; Found in the gene: LotjaGi4g1v0451600	Domains G3DSA:3.40.50.1470 IPR001328 IPR018171 IPR036416 MF_00083 NON_CYTOPLASMIC_DOMAIN PF01195 PS01195 PS01196 PTHR17224 PTHR17224:SF6 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53178 SignalP-TM TIGR00447	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TIGR00447	TIGRFAM	1	11.11