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Lj4g3v2604520.1

Overview

Field Value
Gene ID Lj4g3v2604520
Transcript ID Lj4g3v2604520.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502140697|ref|XP_004504303.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF55008
2 51 50 1.83E-06
IPR006121
PANTHER
PTHR22814
3 113 111 4.90E-43 –
PANTHER
PTHR22814:SF107
3 113 111 4.90E-43 –
Gene3D
G3DSA:3.30.70.100
4 51 48 8.40E-09 –
Pfam
PF00403
4 45 42 2.30E-06
IPR006121
CDD
cd00371
10 48 39 5.30E-04
IPR006121

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0030001
Biological process Metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Subterm of
GO:0046872
Molecular function Metal ion binding Interacting selectively and non-covalently with any metal ion.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj4g3v2604520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2604520.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.