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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2618430 |
| Transcript ID | Lj4g3v2618430.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|357519105|ref|XP_003629841.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 8 | 8 | – | – | |
| PANTHER | 1 | 54 | 54 | 1.40E-107 | – | |
| SignalP | 1 | 29 | 29 | – | – | |
| PANTHER | 1 | 54 | 54 | 1.40E-107 | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 9 | 20 | 12 | – | – | |
| Phobius | 21 | 29 | 9 | – | – | |
| Phobius | 30 | 305 | 276 | – | – | |
| MobiDBLite | 34 | 68 | 35 | – | – | |
| SUPERFAMILY | 94 | 245 | 152 | 1.44E-24 | ||
| PANTHER | 95 | 326 | 232 | 1.40E-107 | – | |
| PANTHER | 95 | 326 | 232 | 1.40E-107 | – | |
| ProSiteProfiles | 98 | 242 | 145 | 19.977 | ||
| Gene3D | 100 | 245 | 146 | 2.90E-18 | ||
| Pfam | 110 | 244 | 135 | 8.00E-20 | ||
| SMART | 140 | 245 | 106 | 6.70E-19 | ||
| MobiDBLite | 266 | 290 | 25 | – | – | |
| TMHMM | 306 | 325 | 20 | – | – | |
| Phobius | 306 | 325 | 20 | – | – | |
| Phobius | 326 | 326 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj4g3v2618430.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2618430.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.