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Lj4g3v2665270.1

Overview

Field Value
Gene ID Lj4g3v2665270
Transcript ID Lj4g3v2665270.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine max] gi|356528394|ref|XP_003532788.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 20 20
ProSiteProfiles 14 78 65 15.58
PANTHER 15 108 94 1.80E-107
PANTHER 15 108 94 1.80E-107
SMART 16 82 67 2.80E-16
SUPERFAMILY 18 80 63 5.13E-17
CDD 19 79 61 2.44E-16
Pfam 20 77 58 1.80E-16
Gene3D 21 77 57 9.40E-19
CDD 71 110 40 2.46E-06
Coils 88 108 21
ProSiteProfiles 158 358 201 24.799
CDD 162 378 217 5.20E-71
Gene3D 166 358 193 1.60E-19
SMART 167 377 211 2.20E-44
Pfam 168 376 209 1.10E-46
SUPERFAMILY 168 379 212 3.30E-34
PANTHER 556 603 48 1.80E-107
PANTHER 556 603 48 1.80E-107

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Molecular function Lipid binding Interacting selectively and non-covalently with a lipid.

Expression data

Expression pattern

Expression pattern of Lj4g3v2665270.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2665270.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.