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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2742950 |
| Transcript ID | Lj4g3v2742950.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chromatin assembly factor 1 subunit B-like [Glycine max] gi|356512829|ref|XP_003525118.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 2 | 41 | 40 | 0.02 | ||
| PANTHER | 2 | 378 | 377 | 1.60E-208 | – | |
| SUPERFAMILY | 9 | 182 | 174 | 8.70E-54 | ||
| ProSiteProfiles | 9 | 182 | 174 | 28.581 | ||
| Gene3D | 10 | 374 | 365 | 6.10E-59 | ||
| Pfam | 10 | 40 | 31 | 0.021 | ||
| ProSiteProfiles | 16 | 43 | 28 | 8.737 | ||
| SMART | 54 | 93 | 40 | 5.40E-04 | ||
| ProSiteProfiles | 61 | 102 | 42 | 12.179 | ||
| SMART | 102 | 141 | 40 | 1.40E-09 | ||
| Pfam | 103 | 141 | 39 | 2.00E-08 | ||
| ProSiteProfiles | 109 | 150 | 42 | 15.12 | ||
| PRINTS | 109 | 125 | 17 | 8.90E-05 | ||
| ProSitePatterns | 128 | 142 | 15 | – | ||
| PRINTS | 128 | 142 | 15 | 8.90E-05 | ||
| SMART | 144 | 183 | 40 | 0.0052 | ||
| Pfam | 145 | 182 | 38 | 8.00E-04 | ||
| ProSiteProfiles | 151 | 182 | 32 | 8.971 | ||
| PRINTS | 165 | 182 | 18 | 8.90E-05 | ||
| SUPERFAMILY | 215 | 366 | 152 | 8.70E-54 | ||
| SMART | 328 | 368 | 41 | 0.049 | ||
| MobiDBLite | 525 | 589 | 65 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v2742950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2742950.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.