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Lj4g3v2754250.1

Overview

Field Value
Gene ID Lj4g3v2754250
Transcript ID Lj4g3v2754250.1
Lotus japonicus genome version MG20 v3.0
Description Protein kinase [Medicago truncatula] gi|357519861|ref|XP_003630219.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF56112
1 181 181 4.05E-50
IPR011009
PANTHER
PTHR13902
1 185 185 6.20E-215 –
ProSiteProfiles
PS50011
1 180 180 33.644
IPR000719
PANTHER
PTHR13902:SF62
1 185 185 6.20E-215 –
SMART
SM00220
1 180 180 6.00E-19
IPR000719
Pfam
PF00069
1 180 180 6.00E-39
IPR000719
Gene3D
G3DSA:1.10.510.10
7 181 175 4.00E-49 –
ProSitePatterns
PS00108
47 59 13 –
IPR008271
PANTHER
PTHR13902
246 503 258 6.20E-215 –
PANTHER
PTHR13902:SF62
246 503 258 6.20E-215 –
Gene3D
G3DSA:3.10.20.90
270 328 59 3.20E-13 –
Coils
Coil
462 489 28 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj4g3v2754250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2754250.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.