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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2820140 |
| Transcript ID | Lj4g3v2820140.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal-like [Glycine max] gi|356512717|ref|XP_003525063.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 306 | 306 | 5.20E-293 | – | |
| PANTHER | 1 | 306 | 306 | 5.20E-293 | – | |
| PIRSF | 46 | 689 | 644 | 8.00E-205 | ||
| CDD | 48 | 691 | 644 | 0 | – | |
| SUPERFAMILY | 63 | 314 | 252 | 1.57E-49 | ||
| Gene3D | 180 | 317 | 138 | 2.80E-47 | – | |
| Pfam | 181 | 297 | 117 | 9.60E-15 | ||
| PANTHER | 323 | 508 | 186 | 5.20E-293 | – | |
| PANTHER | 323 | 508 | 186 | 5.20E-293 | – | |
| SUPERFAMILY | 327 | 509 | 183 | 1.82E-55 | ||
| Pfam | 329 | 486 | 158 | 4.20E-09 | ||
| Gene3D | 338 | 498 | 161 | 9.20E-59 | – | |
| SUPERFAMILY | 530 | 677 | 148 | 6.49E-35 | ||
| Pfam | 534 | 678 | 145 | 3.00E-24 | ||
| Gene3D | 535 | 665 | 131 | 1.00E-32 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Acyl-CoA oxidase activity | Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + hydrogen peroxide. | ||
| Cellular component | Peroxisome | A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism. | ||
| Biological process | Fatty acid metabolic process | The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis. | ||
| Biological process | Fatty acid beta-oxidation | A fatty acid oxidation process that results in the complete oxidation of a long-chain fatty acid. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and occurs by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A; the cycle continues until only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively). | ||
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. | ||
| Molecular function | FAD binding | Interacting selectively and non-covalently with the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. |
Expression pattern of Lj4g3v2820140.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2820140.1, powered by CORGI.
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