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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR009075
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We have found 37 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.656s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0170999.1
n.a. PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Glycine max] gi|356517450|ref|XP_003527400.1| chr0 81857942 81859008 +
2 domain predictions
2 GO terms
Lj0g3v0333489.2
n.a. PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Cicer arietinum] gi|502143952|ref|XP_004505527.1| chr0 174506417 174510611 -
3 domain predictions
2 GO terms
Lj0g3v0333489.3
n.a. PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Cicer arietinum] gi|502143952|ref|XP_004505527.1| chr0 174506417 174510611 -
3 domain predictions
2 GO terms
Lj0g3v0333489.4
n.a. PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Glycine max] gi|356542998|ref|XP_003539950.1| chr0 174507755 174510611 -
2 domain predictions
2 GO terms
Lj0g3v0359129.1
n.a. PREDICTED: isovaleryl-CoA dehydrogenase 1, mitochondrial-like [Glycine max] gi|356539122|ref|XP_003538049.1| chr0 189047304 189052677 -
3 domain predictions
2 GO terms
Lj1g3v0385510.1
n.a. PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Glycine max] gi|356517450|ref|XP_003527400.1| chr1 4344801 4349959 +
3 domain predictions
2 GO terms
Lj1g3v2358960.1
n.a. peroxisomal acyl-CoA oxidase [Glycine max] gi|167961942|dbj|BAG09369.1| chr1 27669600 27675603 +
3 domain predictions
2 GO terms
Lj1g3v2370090.1
n.a. PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal-like [Glycine max] gi|356521028|ref|XP_003529160.1| chr1 27712180 27717487 +
3 domain predictions
2 GO terms
Lj2g3v2000290.1
n.a. Peroxisomal acyl-CoA oxidase 1A [Medicago truncatula] gi|357482107|ref|XP_003611339.1| chr2 29856605 29872650 +
2 domain predictions
2 GO terms
Lj2g3v2000290.3
n.a. PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Cicer arietinum] gi|502160332|ref|XP_004511710.1| chr2 29858218 29873779 +
3 domain predictions
2 GO terms
Lj2g3v2000290.5
n.a. acyl-CoA oxidase [Phaseolus vulgaris] gi|93359566|gb|ABF13309.1| chr2 29860799 29873779 +
2 domain predictions
2 GO terms
Lj4g3v1221460.1
n.a. PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Cicer arietinum] gi|502152467|ref|XP_004508938.1| chr4 18188899 18200410 +
2 domain predictions
2 GO terms
Lj4g3v1223640.1
n.a. PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Cicer arietinum] gi|502152467|ref|XP_004508938.1| chr4 18243376 18247373 +
2 domain predictions
2 GO terms
Lj4g3v2820140.1
n.a. PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal-like [Glycine max] gi|356512717|ref|XP_003525063.1| chr4 37667840 37672417 -
3 domain predictions
2 GO terms
Lj6g3v1468260.1
n.a. PREDICTED: LOW QUALITY PROTEIN: acyl-CoA dehydrogenase family member 10-like [Glycine max] gi|356529378|ref|XP_003533271.1| chr6 17256771 17264277 -
3 domain predictions
2 GO terms
LotjaGi1g1v0442600.1
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 LjG1.1_chr1 93986036 93994332 +
2 domain predictions
2 GO terms
LotjaGi1g1v0442600.2
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 LjG1.1_chr1 93986115 93994169 +
2 domain predictions
2 GO terms
LotjaGi1g1v0442600.3
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 LjG1.1_chr1 93986127 93993853 +
2 domain predictions
2 GO terms
LotjaGi1g1v0442600.4
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 LjG1.1_chr1 93986291 93991462 +
2 domain predictions
2 GO terms
LotjaGi1g1v0442600.5
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 LjG1.1_chr1 93987196 93991462 +
2 domain predictions
2 GO terms
LotjaGi1g1v0442600.6
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 LjG1.1_chr1 93987347 93991462 +
2 domain predictions
2 GO terms
LotjaGi2g1v0362500.1
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G45300.1 isovaleryl-CoA-dehydrogenase; Swiss-Prot: sp|Q9FS88|MBCD_SOLTU 2-methylacyl-CoA dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A151TN61|A0A151TN61_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0362500 LjG1.1_chr2 85984707 85991606 -
2 domain predictions
2 GO terms
LotjaGi2g1v0362500.2
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G45300.1 isovaleryl-CoA-dehydrogenase; Swiss-Prot: sp|Q75IM9|IVD_ORYSJ Isovaleryl-CoA dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A151TN61|A0A151TN61_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0362500 LjG1.1_chr2 85986227 85990365 -
2 domain predictions
2 GO terms
LotjaGi2g1v0362500.3
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G45300.1 isovaleryl-CoA-dehydrogenase; Swiss-Prot: sp|Q75IM9|IVD_ORYSJ Isovaleryl-CoA dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A151TN61|A0A151TN61_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0362500 LjG1.1_chr2 85986227 85990968 -
2 domain predictions
2 GO terms
LotjaGi3g1v0194100.1
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD2|I1JLD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100 LjG1.1_chr3 28169182 28175654 +
2 domain predictions
2 GO terms
LotjaGi3g1v0194100.2
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD2|I1JLD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100 LjG1.1_chr3 28169191 28175885 +
2 domain predictions
2 GO terms
LotjaGi3g1v0194100.3
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD2|I1JLD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100 LjG1.1_chr3 28170668 28175317 +
2 domain predictions
2 GO terms
LotjaGi3g1v0194100.4
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD2|I1JLD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100 LjG1.1_chr3 28171723 28175317 +
2 domain predictions
2 GO terms
LotjaGi3g1v0194100.5
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD2|I1JLD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100 LjG1.1_chr3 28171819 28175317 +
2 domain predictions
2 GO terms
LotjaGi3g1v0194100.6
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD3|I1JLD3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100 LjG1.1_chr3 28171832 28175317 +
2 domain predictions
2 GO terms
LotjaGi3g1v0244500.1
n.a. Acyl-coenzyme A oxidase; TAIR: AT1G06290.1 acyl-CoA oxidase 3; Swiss-Prot: sp|P0CZ23|ACOX3_ARATH Acyl-coenzyme A oxidase 3, peroxisomal; TrEMBL-Plants: tr|G7JUZ2|G7JUZ2_MEDTR Acyl-coenzyme A oxidase; Found in the gene: LotjaGi3g1v0244500 LjG1.1_chr3 39927659 39933182 -
2 domain predictions
2 GO terms
LotjaGi3g1v0244600.1
n.a. Acyl-coenzyme A oxidase; TAIR: AT1G06290.1 acyl-CoA oxidase 3; Swiss-Prot: sp|P0CZ23|ACOX3_ARATH Acyl-coenzyme A oxidase 3, peroxisomal; TrEMBL-Plants: tr|G7JUZ2|G7JUZ2_MEDTR Acyl-coenzyme A oxidase; Found in the gene: LotjaGi3g1v0244600 LjG1.1_chr3 39964530 39970713 -
2 domain predictions
2 GO terms
LotjaGi4g1v0399400.1
n.a. Acyl-coenzyme A oxidase; TAIR: AT5G65110.1 acyl-CoA oxidase 2; Swiss-Prot: sp|O65201|ACOX2_ARATH Acyl-coenzyme A oxidase 2, peroxisomal; TrEMBL-Plants: tr|A0A151RRP6|A0A151RRP6_CAJCA Acyl-coenzyme A oxidase; Found in the gene: LotjaGi4g1v0399400 LjG1.1_chr4 77675391 77684404 +
2 domain predictions
2 GO terms
LotjaGi4g1v0399400.2
n.a. Acyl-coenzyme A oxidase; TAIR: AT5G65110.1 acyl-CoA oxidase 2; Swiss-Prot: sp|O65201|ACOX2_ARATH Acyl-coenzyme A oxidase 2, peroxisomal; TrEMBL-Plants: tr|A0A151RRP6|A0A151RRP6_CAJCA Acyl-coenzyme A oxidase; Found in the gene: LotjaGi4g1v0399400 LjG1.1_chr4 77675588 77679536 +
2 domain predictions
2 GO terms
LotjaGi6g1v0252100.1
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G06810.1 acyl-CoA dehydrogenase-like protein; Swiss-Prot: sp|Q8RWZ3|IBR3_ARATH Probable acyl-CoA dehydrogenase IBR3; TrEMBL-Plants: tr|V7AZ54|V7AZ54_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0252100 LjG1.1_chr6 56424768 56431797 -
2 domain predictions
2 GO terms
LotjaGi6g1v0252100.2
n.a. Acyl-CoA dehydrogenase-related family protein; TAIR: AT3G06810.1 acyl-CoA dehydrogenase-like protein; Swiss-Prot: sp|Q8RWZ3|IBR3_ARATH Probable acyl-CoA dehydrogenase IBR3; TrEMBL-Plants: tr|A0A1J7FV79|A0A1J7FV79_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0252100 LjG1.1_chr6 56424768 56431818 -
2 domain predictions
2 GO terms
LotjaGi6g1v0252100.3
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G06810.1 acyl-CoA dehydrogenase-like protein; Swiss-Prot: sp|Q8RWZ3|IBR3_ARATH Probable acyl-CoA dehydrogenase IBR3; TrEMBL-Plants: tr|A0A0R0GAV8|A0A0R0GAV8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0252100 LjG1.1_chr6 56424768 56431818 -
2 domain predictions
2 GO terms