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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2860620 |
| Transcript ID | Lj4g3v2860620.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Respiratory burst oxidase-like protein [Medicago truncatula] gi|357520297|ref|XP_003630437.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 42 | 42 | – | – | |
| Phobius | 1 | 375 | 375 | – | – | |
| SFLD | 25 | 694 | 670 | 0 | – | |
| PANTHER | 91 | 287 | 197 | 0 | – | |
| PANTHER | 91 | 287 | 197 | 0 | – | |
| Pfam | 126 | 226 | 101 | 4.80E-32 | ||
| SUPERFAMILY | 154 | 290 | 137 | 2.99E-16 | ||
| Gene3D | 155 | 287 | 133 | 1.10E-13 | ||
| ProSiteProfiles | 223 | 258 | 36 | 11.556 | ||
| ProSitePatterns | 236 | 248 | 13 | – | ||
| PANTHER | 318 | 693 | 376 | 0 | – | |
| PANTHER | 318 | 693 | 376 | 0 | – | |
| SFLD | 360 | 693 | 334 | 4.90E-32 | – | |
| TMHMM | 373 | 395 | 23 | – | – | |
| Phobius | 376 | 395 | 20 | – | – | |
| Phobius | 396 | 459 | 64 | – | – | |
| Pfam | 415 | 571 | 157 | 1.80E-22 | ||
| TMHMM | 460 | 479 | 20 | – | – | |
| Phobius | 460 | 478 | 19 | – | – | |
| PRINTS | 461 | 479 | 19 | 5.40E-05 | ||
| Phobius | 479 | 514 | 36 | – | – | |
| TMHMM | 513 | 532 | 20 | – | – | |
| Phobius | 515 | 534 | 20 | – | – | |
| Phobius | 535 | 554 | 20 | – | – | |
| TMHMM | 553 | 575 | 23 | – | – | |
| PRINTS | 553 | 573 | 21 | 5.40E-05 | ||
| Phobius | 555 | 575 | 21 | – | – | |
| Phobius | 576 | 586 | 11 | – | – | |
| Phobius | 587 | 605 | 19 | – | – | |
| TMHMM | 588 | 605 | 18 | – | – | |
| Phobius | 606 | 701 | 96 | – | – | |
| ProSiteProfiles | 610 | 701 | 92 | 11.52 | ||
| Gene3D | 614 | 692 | 79 | 2.90E-12 | – | |
| SUPERFAMILY | 614 | 692 | 79 | 1.32E-15 | ||
| Pfam | 614 | 693 | 80 | 9.40E-27 | ||
| CDD | 617 | 694 | 78 | 6.94E-17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj4g3v2860620.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2860620.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.