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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2917630 |
| Transcript ID | Lj4g3v2917630.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Uncharacterized protein TCM_016211 [Theobroma cacao] gi|508777412|gb|EOY24668.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 40 | 40 | – | – | |
| Gene3D | 6 | 117 | 112 | 9.90E-14 | ||
| ProSiteProfiles | 30 | 107 | 78 | 13.078 | ||
| PANTHER | 32 | 95 | 64 | 2.50E-41 | – | |
| Pfam | 32 | 91 | 60 | 5.10E-08 | ||
| SUPERFAMILY | 35 | 94 | 60 | 3.92E-14 | ||
| MobiDBLite | 90 | 145 | 56 | – | – | |
| PANTHER | 210 | 310 | 101 | 2.50E-41 | – | |
| Gene3D | 217 | 290 | 74 | 6.60E-13 | ||
| ProSiteProfiles | 220 | 287 | 68 | 14.845 | ||
| SUPERFAMILY | 229 | 277 | 49 | 5.56E-13 | ||
| Pfam | 230 | 275 | 46 | 1.40E-06 | ||
| MobiDBLite | 291 | 313 | 23 | – | – | |
| MobiDBLite | 326 | 355 | 30 | – | – | |
| PANTHER | 328 | 455 | 128 | 2.50E-41 | – | |
| MobiDBLite | 408 | 430 | 23 | – | – | |
| MobiDBLite | 455 | 481 | 27 | – | – | |
| MobiDBLite | 501 | 601 | 101 | – | – | |
| MobiDBLite | 653 | 852 | 200 | – | – | |
| PANTHER | 950 | 1148 | 199 | 2.50E-41 | – | |
| MobiDBLite | 1086 | 1106 | 21 | – | – | |
| MobiDBLite | 1124 | 1188 | 65 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Cellular component | Host cell nucleus | A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction. |
Expression pattern of Lj4g3v2917630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2917630.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.