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Lj4g3v2962370.1

Overview

Field Value
Gene ID Lj4g3v2962370
Transcript ID Lj4g3v2962370.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: kinesin-4-like isoform X1 [Cicer arietinum] gi|502139280|ref|XP_004503714.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 23 23
SUPERFAMILY 38 133 96 8.64E-12
ProSiteProfiles 38 135 98 9.508
Gene3D 39 133 95 1.60E-10
PANTHER 44 97 54 2.60E-187
PANTHER 44 97 54 2.60E-187
PANTHER 239 248 10 2.60E-187
PANTHER 239 248 10 2.60E-187
Coils 355 411 57
SUPERFAMILY 465 739 275 3.15E-75
PANTHER 479 739 261 2.60E-187
PANTHER 479 739 261 2.60E-187
Gene3D 495 739 245 6.30E-75
SMART 497 740 244 1.40E-55
ProSiteProfiles 499 740 242 70.806
Pfam 505 739 235 2.20E-63
PRINTS 574 595 22 2.10E-24
PRINTS 697 714 18 2.10E-24
PRINTS 728 740 13 2.10E-24

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Microtubule-based movement A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
Molecular function Microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.

Expression data

Expression pattern

Expression pattern of Lj4g3v2962370.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2962370.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.