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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2963480 |
| Transcript ID | Lj4g3v2963480.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable aquaporin PIP1-2-like [Cicer arietinum] gi|502139259|ref|XP_004503705.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 49 | 49 | – | – | |
| MobiDBLite | 1 | 34 | 34 | – | – | |
| PANTHER | 1 | 281 | 281 | 2.40E-212 | – | |
| PANTHER | 1 | 281 | 281 | 2.40E-212 | ||
| Gene3D | 23 | 279 | 257 | 3.40E-87 | ||
| SUPERFAMILY | 44 | 279 | 236 | 3.27E-63 | ||
| Pfam | 44 | 274 | 231 | 5.70E-81 | ||
| Phobius | 50 | 69 | 20 | – | – | |
| CDD | 52 | 277 | 226 | 1.92E-75 | ||
| PRINTS | 52 | 71 | 20 | 9.30E-71 | ||
| TMHMM | 53 | 75 | 23 | – | – | |
| TIGRFAM | 56 | 273 | 218 | 2.20E-65 | ||
| Phobius | 70 | 89 | 20 | – | – | |
| TMHMM | 90 | 112 | 23 | – | – | |
| Phobius | 90 | 113 | 24 | – | – | |
| PRINTS | 94 | 118 | 25 | 9.30E-71 | ||
| ProSitePatterns | 112 | 120 | 9 | – | ||
| Phobius | 114 | 132 | 19 | – | – | |
| PRINTS | 131 | 150 | 20 | 9.30E-71 | ||
| Phobius | 133 | 153 | 21 | – | – | |
| TMHMM | 133 | 150 | 18 | – | – | |
| Phobius | 154 | 209 | 56 | – | – | |
| TMHMM | 178 | 195 | 18 | – | – | |
| PRINTS | 181 | 199 | 19 | 9.30E-71 | ||
| TMHMM | 208 | 230 | 23 | – | – | |
| Phobius | 210 | 230 | 21 | – | – | |
| PRINTS | 217 | 239 | 23 | 9.30E-71 | ||
| Phobius | 231 | 256 | 26 | – | – | |
| TMHMM | 256 | 278 | 23 | – | – | |
| PRINTS | 257 | 277 | 21 | 9.30E-71 | ||
| Phobius | 257 | 278 | 22 | – | – | |
| Phobius | 279 | 287 | 9 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v2963480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2963480.1, powered by CORGI.
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