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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3001240 |
| Transcript ID | Lj4g3v3001240.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: respiratory burst oxidase homolog protein A-like [Cicer arietinum] gi|502139151|ref|XP_004503663.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 385 | 385 | – | – | |
| MobiDBLite | 1 | 35 | 35 | – | – | |
| MobiDBLite | 70 | 89 | 20 | – | – | |
| SFLD | 106 | 948 | 843 | 0 | – | |
| MobiDBLite | 129 | 149 | 21 | – | – | |
| PANTHER | 131 | 772 | 642 | 0 | – | |
| PANTHER | 131 | 772 | 642 | 0 | – | |
| Pfam | 166 | 265 | 100 | 8.00E-38 | ||
| SUPERFAMILY | 194 | 344 | 151 | 5.68E-21 | ||
| Gene3D | 205 | 335 | 131 | 2.30E-14 | ||
| CDD | 226 | 292 | 67 | 1.15E-05 | ||
| ProSiteProfiles | 262 | 297 | 36 | 10.971 | ||
| ProSitePatterns | 275 | 287 | 13 | – | ||
| Coils | 293 | 313 | 21 | – | – | |
| SFLD | 378 | 769 | 392 | 0 | – | |
| TMHMM | 383 | 405 | 23 | – | – | |
| Phobius | 386 | 405 | 20 | – | – | |
| Phobius | 406 | 521 | 116 | – | – | |
| Pfam | 425 | 581 | 157 | 2.40E-20 | ||
| TMHMM | 464 | 483 | 20 | – | – | |
| Phobius | 522 | 542 | 21 | – | – | |
| TMHMM | 525 | 547 | 23 | – | – | |
| PRINTS | 526 | 549 | 24 | 6.10E-15 | ||
| Phobius | 543 | 562 | 20 | – | – | |
| TMHMM | 560 | 582 | 23 | – | – | |
| Phobius | 563 | 581 | 19 | – | – | |
| Phobius | 582 | 592 | 11 | – | – | |
| Phobius | 593 | 610 | 18 | – | – | |
| TMHMM | 597 | 619 | 23 | – | – | |
| Phobius | 611 | 745 | 135 | – | – | |
| ProSiteProfiles | 620 | 740 | 121 | 15.141 | ||
| SUPERFAMILY | 623 | 736 | 114 | 5.21E-17 | ||
| Pfam | 624 | 737 | 114 | 6.10E-33 | ||
| Gene3D | 625 | 701 | 77 | 1.30E-12 | – | |
| CDD | 627 | 890 | 264 | 6.24E-44 | – | |
| PRINTS | 726 | 739 | 14 | 6.10E-15 | ||
| SUPERFAMILY | 741 | 769 | 29 | 4.52E-09 | – | |
| Gene3D | 743 | 769 | 27 | 2.10E-11 | – | |
| Pfam | 744 | 930 | 187 | 3.40E-53 | ||
| Phobius | 746 | 763 | 18 | – | – | |
| TMHMM | 746 | 763 | 18 | – | – | |
| PRINTS | 749 | 766 | 18 | 6.10E-15 | ||
| Phobius | 764 | 948 | 185 | – | – | |
| PANTHER | 805 | 948 | 144 | 0 | – | |
| PANTHER | 805 | 948 | 144 | 0 | – | |
| Gene3D | 809 | 948 | 140 | 2.10E-11 | – | |
| SUPERFAMILY | 809 | 948 | 140 | 4.52E-09 | – | |
| SFLD | 810 | 948 | 139 | 3.60E-13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj4g3v3001240.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3001240.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.