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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3015290 |
| Transcript ID | Lj4g3v3015290.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: K(+) efflux antiporter 4-like [Glycine max] gi|356523691|ref|XP_003530469.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 3 | 14 | 12 | – | – | |
| Phobius | 15 | 25 | 11 | – | – | |
| Phobius | 26 | 160 | 135 | – | – | |
| PANTHER | 58 | 553 | 496 | 0 | – | |
| PANTHER | 58 | 553 | 496 | 0 | – | |
| MobiDBLite | 68 | 88 | 21 | – | – | |
| Phobius | 161 | 180 | 20 | – | – | |
| TMHMM | 161 | 183 | 23 | – | – | |
| Pfam | 166 | 535 | 370 | 5.50E-74 | ||
| Phobius | 181 | 186 | 6 | – | – | |
| Phobius | 187 | 205 | 19 | – | – | |
| TMHMM | 190 | 209 | 20 | – | – | |
| Phobius | 206 | 210 | 5 | – | – | |
| Phobius | 211 | 228 | 18 | – | – | |
| TMHMM | 214 | 233 | 20 | – | – | |
| Phobius | 229 | 239 | 11 | – | – | |
| Phobius | 240 | 261 | 22 | – | – | |
| TMHMM | 240 | 262 | 23 | – | – | |
| Phobius | 262 | 272 | 11 | – | – | |
| TMHMM | 272 | 291 | 20 | – | – | |
| Phobius | 273 | 291 | 19 | – | – | |
| Phobius | 292 | 302 | 11 | – | – | |
| Phobius | 303 | 322 | 20 | – | – | |
| TMHMM | 304 | 326 | 23 | – | – | |
| Phobius | 323 | 341 | 19 | – | – | |
| TMHMM | 341 | 363 | 23 | – | – | |
| Phobius | 342 | 364 | 23 | – | – | |
| Phobius | 365 | 375 | 11 | – | – | |
| Phobius | 376 | 392 | 17 | – | – | |
| Phobius | 393 | 397 | 5 | – | – | |
| Phobius | 398 | 417 | 20 | – | – | |
| Phobius | 418 | 428 | 11 | – | – | |
| Phobius | 429 | 448 | 20 | – | – | |
| TMHMM | 430 | 449 | 20 | – | – | |
| Phobius | 449 | 453 | 5 | – | – | |
| Phobius | 454 | 473 | 20 | – | – | |
| TMHMM | 454 | 476 | 23 | – | – | |
| Phobius | 474 | 484 | 11 | – | – | |
| TMHMM | 483 | 505 | 23 | – | – | |
| Phobius | 485 | 503 | 19 | – | – | |
| Phobius | 504 | 514 | 11 | – | – | |
| TMHMM | 515 | 537 | 23 | – | – | |
| Phobius | 515 | 534 | 20 | – | – | |
| Phobius | 535 | 568 | 34 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v3015290.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3015290.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.