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Lj4g3v3058250.2

Overview

Field Value
Gene ID Lj4g3v3058250
Transcript ID Lj4g3v3058250.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform X1 [Cicer arietinum] gi|502138583|ref|XP_004503461.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP
SignalP-TM_GRAM_POSITIVE
1 13 13 – –
TIGRFAM
TIGR00068
70 217 148 3.30E-67
IPR004361
PANTHER
PTHR10374:SF12
71 248 178 1.90E-132 –
PANTHER
PTHR10374
71 248 178 1.90E-132 –
SUPERFAMILY
SSF54593
84 210 127 4.43E-32
IPR029068
Gene3D
G3DSA:3.10.180.10
84 212 129 9.70E-43
IPR029068
CDD
cd07233
85 206 122 2.84E-55 –
Pfam
PF00903
85 205 121 1.60E-22
IPR004360
ProSitePatterns
PS00934
87 108 22 –
IPR018146
TIGRFAM
TIGR00068
215 339 125 1.20E-46
IPR004361
Gene3D
G3DSA:3.10.180.10
215 338 124 2.70E-33
IPR029068
SUPERFAMILY
SSF54593
215 336 122 1.34E-24
IPR029068
CDD
cd07233
217 330 114 3.64E-39 –
Pfam
PF00903
217 332 116 1.30E-15
IPR004360
ProSitePatterns
PS00934
217 238 22 –
IPR018146

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004462
Molecular function Lactoylglutathione lyase activity Catalysis of the reaction: (R)-S-lactoylglutathione = glutathione + methylglyoxal.
Subterm of
GO:0046872
Molecular function Metal ion binding Interacting selectively and non-covalently with any metal ion.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj4g3v3058250.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v3058250.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.