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Lj4g3v3061520.1

Overview

Field Value
Gene ID Lj4g3v3061520
Transcript ID Lj4g3v3061520.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: cyclin-dependent kinase F-1-like [Cicer arietinum] gi|502138553|ref|XP_004503449.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS50011
1 395 395 33.135
IPR000719
PANTHER
PTHR24056:SF171
2 148 147 1.10E-168 –
PANTHER
PTHR24056
2 148 147 1.10E-168 –
SMART
SM00220
10 395 386 5.60E-61
IPR000719
SUPERFAMILY
SSF56112
20 156 137 5.08E-67
IPR011009
Gene3D
G3DSA:3.30.200.20
21 100 80 1.20E-12 –
Pfam
PF00069
36 151 116 1.70E-27
IPR000719
Gene3D
G3DSA:1.10.510.10
101 155 55 1.00E-51 –
ProSitePatterns
PS00108
118 130 13 –
IPR008271
MobiDBLite
mobidb-lite
165 194 30 – –
Pfam
PF00069
261 395 135 5.70E-23
IPR000719
PANTHER
PTHR24056:SF171
261 443 183 1.10E-168 –
PANTHER
PTHR24056
261 443 183 1.10E-168 –
Gene3D
G3DSA:1.10.510.10
268 399 132 1.00E-51 –
SUPERFAMILY
SSF56112
269 408 140 5.08E-67
IPR011009

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj4g3v3061520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v3061520.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.