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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3114100 |
| Transcript ID | Lj4g3v3114100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: MATE efflux family protein DTX1-like [Glycine max] gi|356527876|ref|XP_003532532.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 113 | 113 | 3.40E-27 | ||
| TIGRFAM | 1 | 350 | 350 | 3.00E-84 | ||
| PANTHER | 1 | 392 | 392 | 7.70E-238 | – | |
| CDD | 1 | 379 | 379 | 3.88E-156 | – | |
| PANTHER | 1 | 392 | 392 | 7.70E-238 | – | |
| Phobius | 1 | 27 | 27 | – | – | |
| Phobius | 28 | 46 | 19 | – | – | |
| TMHMM | 29 | 51 | 23 | – | – | |
| Phobius | 47 | 65 | 19 | – | – | |
| TMHMM | 66 | 83 | 18 | – | – | |
| Phobius | 66 | 83 | 18 | – | – | |
| Phobius | 84 | 91 | 8 | – | – | |
| Phobius | 92 | 115 | 24 | – | – | |
| TMHMM | 92 | 114 | 23 | – | – | |
| Phobius | 116 | 126 | 11 | – | – | |
| TMHMM | 124 | 146 | 23 | – | – | |
| Phobius | 127 | 146 | 20 | – | – | |
| Phobius | 147 | 166 | 20 | – | – | |
| TMHMM | 166 | 188 | 23 | – | – | |
| Phobius | 167 | 185 | 19 | – | – | |
| Pfam | 174 | 336 | 163 | 8.80E-29 | ||
| Phobius | 186 | 204 | 19 | – | – | |
| TMHMM | 203 | 225 | 23 | – | – | |
| Phobius | 205 | 227 | 23 | – | – | |
| Phobius | 228 | 247 | 20 | – | – | |
| TMHMM | 245 | 267 | 23 | – | – | |
| Phobius | 248 | 273 | 26 | – | – | |
| Phobius | 274 | 284 | 11 | – | – | |
| TMHMM | 282 | 299 | 18 | – | – | |
| Phobius | 285 | 306 | 22 | – | – | |
| Phobius | 307 | 317 | 11 | – | – | |
| Phobius | 318 | 342 | 25 | – | – | |
| TMHMM | 320 | 342 | 23 | – | – | |
| Phobius | 343 | 347 | 5 | – | – | |
| TMHMM | 347 | 369 | 23 | – | – | |
| Phobius | 348 | 369 | 22 | – | – | |
| Phobius | 370 | 395 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v3114100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3114100.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.