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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0013180 |
| Transcript ID | Lj5g3v0013180.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | binding protein [Arabidopsis lyrata subsp]. lyrata] gi|297802544|ref|XP_002869156.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 59 | 59 | – | – | |
| MobiDBLite | 23 | 51 | 29 | – | – | |
| Phobius | 60 | 78 | 19 | – | – | |
| Phobius | 79 | 1214 | 1136 | – | – | |
| SUPERFAMILY | 124 | 273 | 150 | 1.66E-12 | ||
| MobiDBLite | 302 | 325 | 24 | – | – | |
| Gene3D | 431 | 612 | 182 | 7.30E-05 | ||
| SUPERFAMILY | 444 | 628 | 185 | 1.66E-12 | ||
| PANTHER | 648 | 1209 | 562 | 7.50E-161 | – | |
| MobiDBLite | 759 | 785 | 27 | – | – | |
| SUPERFAMILY | 952 | 1208 | 257 | 1.12E-14 | ||
| Gene3D | 953 | 1102 | 150 | 2.70E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj5g3v0013180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0013180.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.