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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0034260 |
| Transcript ID | Lj5g3v0034260.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Calcineurin-like metallo-phosphoesterase superfamily protein isoform 1 [Theobroma cacao] gi|508722651|gb|EOY14548.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | – | – | |
| PANTHER | 17 | 768 | 752 | 0 | – | |
| PANTHER | 17 | 768 | 752 | 0 | – | |
| TMHMM | 36 | 58 | 23 | – | – | |
| Phobius | 37 | 55 | 19 | – | – | |
| Phobius | 56 | 66 | 11 | – | – | |
| TMHMM | 65 | 87 | 23 | – | – | |
| Phobius | 67 | 86 | 20 | – | – | |
| Phobius | 87 | 97 | 11 | – | – | |
| TMHMM | 97 | 116 | 20 | – | – | |
| Phobius | 98 | 116 | 19 | – | – | |
| Phobius | 117 | 127 | 11 | – | – | |
| Phobius | 128 | 155 | 28 | – | – | |
| TMHMM | 129 | 151 | 23 | – | – | |
| Phobius | 156 | 166 | 11 | – | – | |
| TMHMM | 166 | 188 | 23 | – | – | |
| Phobius | 167 | 188 | 22 | – | – | |
| Phobius | 189 | 273 | 85 | – | – | |
| Phobius | 274 | 291 | 18 | – | – | |
| Phobius | 292 | 333 | 42 | – | – | |
| Phobius | 334 | 352 | 19 | – | – | |
| Phobius | 353 | 686 | 334 | – | – | |
| Gene3D | 381 | 645 | 265 | 3.80E-10 | ||
| SUPERFAMILY | 382 | 440 | 59 | 1.99E-18 | ||
| SUPERFAMILY | 473 | 648 | 176 | 1.99E-18 | ||
| Phobius | 687 | 705 | 19 | – | – | |
| TMHMM | 691 | 708 | 18 | – | – | |
| Phobius | 706 | 733 | 28 | – | – | |
| Phobius | 734 | 759 | 26 | – | – | |
| TMHMM | 737 | 759 | 23 | – | – | |
| Phobius | 760 | 769 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj5g3v0034260.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0034260.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.