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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0279130 |
| Transcript ID | Lj5g3v0279130.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: Fanconi anemia group J protein homolog isoform X1 [Cicer arietinum] gi|502162740|ref|XP_004512601.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 445 | 445 | 0 | – | |
| PANTHER | 1 | 445 | 445 | 0 | – | |
| ProSiteProfiles | 1 | 190 | 190 | 12.715 | ||
| Pfam | 2 | 140 | 139 | 9.30E-30 | ||
| SUPERFAMILY | 76 | 146 | 71 | 3.54E-10 | ||
| SUPERFAMILY | 304 | 318 | 15 | 3.54E-10 | ||
| SUPERFAMILY | 354 | 409 | 56 | 3.54E-10 | ||
| Pfam | 380 | 589 | 210 | 1.50E-57 | ||
| SMART | 397 | 577 | 181 | 2.60E-33 | ||
| SUPERFAMILY | 439 | 571 | 133 | 3.54E-10 | ||
| PANTHER | 473 | 695 | 223 | 0 | – | |
| PANTHER | 473 | 695 | 223 | 0 | – | |
| MobiDBLite | 761 | 780 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA helix. | ||
| Molecular function | Helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Nucleobase-containing compound metabolic process | Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. | ||
| Molecular function | Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | Catalysis of the hydrolysis of any acid anhydride which contains phosphorus. |
Expression pattern of Lj5g3v0279130.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0279130.2, powered by CORGI.
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