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Lj5g3v0465920.1

Overview

Field Value
Gene ID Lj5g3v0465920
Transcript ID Lj5g3v0465920.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max] gi|356554110|ref|XP_003545392.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23257
1 361 361 7.60E-201 –
PANTHER
PTHR23257:SF504
1 361 361 7.60E-201 –
PIRSF
PIRSF000654
17 359 343 3.60E-57 –
Gene3D
G3DSA:3.30.200.20
53 162 110 1.10E-21 –
SUPERFAMILY
SSF56112
54 346 293 3.73E-72
IPR011009
SMART
SM00220
82 357 276 1.40E-48
IPR000719
ProSiteProfiles
PS50011
82 357 276 39.863
IPR000719
Pfam
PF00069
83 345 263 2.70E-48
IPR000719
ProSitePatterns
PS00107
88 109 22 –
IPR017441
CDD
cd13999
88 346 259 1.10E-90 –
Gene3D
G3DSA:1.10.510.10
184 346 163 2.50E-46 –
ProSitePatterns
PS00108
211 223 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj5g3v0465920.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0465920.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.