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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0539930 |
| Transcript ID | Lj5g3v0539930.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: carbon catabolite repressor protein 4 homolog 6-like [Glycine max] gi|356554329|ref|XP_003545500.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | – | – | |
| SignalP | 1 | 11 | 11 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| MobiDBLite | 1 | 100 | 100 | – | – | |
| Phobius | 10 | 20 | 11 | – | – | |
| Phobius | 21 | 25 | 5 | – | – | |
| Phobius | 26 | 818 | 793 | – | – | |
| PANTHER | 73 | 344 | 272 | 6.40E-249 | – | |
| PANTHER | 73 | 344 | 272 | 6.40E-249 | – | |
| SUPERFAMILY | 116 | 327 | 212 | 9.42E-29 | ||
| Pfam | 130 | 798 | 669 | 4.20E-09 | ||
| Gene3D | 156 | 314 | 159 | 2.10E-12 | ||
| MobiDBLite | 337 | 400 | 64 | – | – | |
| MobiDBLite | 487 | 533 | 47 | – | – | |
| MobiDBLite | 675 | 702 | 28 | – | – | |
| PANTHER | 702 | 816 | 115 | 6.40E-249 | – | |
| PANTHER | 702 | 816 | 115 | 6.40E-249 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj5g3v0539930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0539930.1, powered by CORGI.
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