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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0615430 |
| Transcript ID | Lj5g3v0615430.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: solute carrier family 35 member F5-like isoform X1 [Cicer arietinum] gi|502103562|ref|XP_004492311.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| Pfam | 12 | 138 | 127 | 1.60E-09 | ||
| Phobius | 12 | 34 | 23 | – | – | |
| PANTHER | 14 | 256 | 243 | 1.40E-138 | – | |
| PANTHER | 14 | 256 | 243 | 1.40E-138 | – | |
| TMHMM | 15 | 34 | 20 | – | – | |
| SUPERFAMILY | 16 | 61 | 46 | 3.92E-08 | – | |
| Phobius | 35 | 40 | 6 | – | – | |
| Phobius | 41 | 59 | 19 | – | – | |
| TMHMM | 41 | 59 | 19 | – | – | |
| Phobius | 60 | 73 | 14 | – | – | |
| TMHMM | 74 | 93 | 20 | – | – | |
| Phobius | 74 | 92 | 19 | – | – | |
| Phobius | 93 | 111 | 19 | – | – | |
| TMHMM | 112 | 134 | 23 | – | – | |
| Phobius | 112 | 133 | 22 | – | – | |
| Phobius | 134 | 138 | 5 | – | – | |
| Phobius | 139 | 156 | 18 | – | – | |
| Phobius | 157 | 167 | 11 | – | – | |
| Phobius | 168 | 189 | 22 | – | – | |
| TMHMM | 169 | 191 | 23 | – | – | |
| Phobius | 190 | 200 | 11 | – | – | |
| Phobius | 201 | 219 | 19 | – | – | |
| TMHMM | 204 | 221 | 18 | – | – | |
| Phobius | 220 | 260 | 41 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0615430.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0615430.1, powered by CORGI.
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