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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR009262
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.899s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3329370.1
n.a. PREDICTED: solute carrier family 35 member F1-like [Glycine max] gi|356569103|ref|XP_003552745.1| chr1 37617367 37624274 -
2 domain predictions
3 GO terms
Lj1g3v3329370.2
n.a. PREDICTED: solute carrier family 35 member F1-like [Glycine max] gi|356569103|ref|XP_003552745.1| chr1 37617367 37619278 -
2 domain predictions
3 GO terms
Lj1g3v3530560.1
n.a. PREDICTED: solute carrier family 35 member F5-like isoform X1 [Cicer arietinum] gi|502103562|ref|XP_004492311.1| chr1 40515391 40521324 -
2 domain predictions
3 GO terms
Lj1g3v4714130.1
n.a. Solute carrier family 35 member F1 [Medicago truncatula] gi|357511003|ref|XP_003625790.1| chr1 56180559 56183077 -
2 domain predictions
3 GO terms
Lj1g3v4714130.2
n.a. Solute carrier family 35 member F1 [Medicago truncatula] gi|357511003|ref|XP_003625790.1| chr1 56180559 56183077 -
2 domain predictions
3 GO terms
Lj2g3v1389330.1
n.a. Solute carrier family 35 member F5 [Medicago truncatula] gi|357505295|ref|XP_003622936.1| chr2 21963981 21969984 -
2 domain predictions
3 GO terms
Lj5g3v0615430.1
n.a. PREDICTED: solute carrier family 35 member F5-like isoform X1 [Cicer arietinum] gi|502103562|ref|XP_004492311.1| chr5 7704512 7708166 +
2 domain predictions
3 GO terms
Lj5g3v2300290.1
n.a. PREDICTED: solute carrier family 35 member F1-like [Glycine max] gi|356534508|ref|XP_003535795.1| chr5 33999432 34000078 -
2 domain predictions
3 GO terms
LotjaGi1g1v0553400.1
n.a. Solute carrier family 35 protein; TAIR: AT3G59310.1 solute carrier family 35 protein (DUF914); Swiss-Prot: sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1; TrEMBL-Plants: tr|I3T028|I3T028_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0553400 LjG1.1_chr1 108522395 108529580 -
2 domain predictions
3 GO terms
LotjaGi1g1v0585800.1
n.a. Solute carrier family 35 protein; TAIR: AT3G07080.1 EamA-like transporter family; Swiss-Prot: sp|Q5R6J3|S35F5_PONAB Solute carrier family 35 member F5; TrEMBL-Plants: tr|I1KZA3|I1KZA3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0585800 LjG1.1_chr1 112571586 112577914 +
2 domain predictions
3 GO terms
LotjaGi1g1v0677100.1
n.a. Solute carrier family 35 protein; TAIR: AT3G59310.1 solute carrier family 35 protein (DUF914); Swiss-Prot: sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1; TrEMBL-Plants: tr|G7L611|G7L611_MEDTR UAA transporter family protein; Found in the gene: LotjaGi1g1v0677100 LjG1.1_chr1 124384519 124387976 +
2 domain predictions
3 GO terms