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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0615600 |
| Transcript ID | Lj5g3v0615600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | protein pigment defective 149 [Arabidopsis thaliana] gi|18416778|ref|NP_568257.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 103 | 103 | – | – | |
| PANTHER | 84 | 257 | 174 | 1.00E-84 | ||
| PANTHER | 84 | 257 | 174 | 1.00E-84 | – | |
| TMHMM | 98 | 120 | 23 | – | – | |
| Phobius | 104 | 120 | 17 | – | – | |
| Phobius | 121 | 131 | 11 | – | – | |
| TMHMM | 130 | 152 | 23 | – | – | |
| Pfam | 131 | 220 | 90 | 3.80E-22 | ||
| Phobius | 132 | 153 | 22 | – | – | |
| Phobius | 154 | 164 | 11 | – | – | |
| Phobius | 165 | 187 | 23 | – | – | |
| TMHMM | 165 | 187 | 23 | – | – | |
| Phobius | 188 | 192 | 5 | – | – | |
| Phobius | 193 | 210 | 18 | – | – | |
| Phobius | 211 | 266 | 56 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj5g3v0615600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0615600.2, powered by CORGI.
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