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Lj5g3v0746910.1

Overview

Field Value
Gene ID Lj5g3v0746910
Transcript ID Lj5g3v0746910.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: carbon catabolite repressor protein 4 homolog 2-like [Glycine max] gi|356530679|ref|XP_003533908.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 508 508 2.50E-273
PANTHER 1 508 508 2.50E-273
Pfam 71 110 40 7.50E-08
SUPERFAMILY 246 472 227 4.84E-39
Gene3D 252 466 215 8.30E-12
CDD 253 594 342 7.52E-152
Pfam 255 585 331 5.40E-14
SUPERFAMILY 515 595 81 4.84E-39
PANTHER 524 601 78 2.50E-273
PANTHER 524 601 78 2.50E-273

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj5g3v0746910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0746910.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.