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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR031615
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.371s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0008679.1
n.a. PREDICTED: methionine aminopeptidase 1A-like [Cicer arietinum] gi|502168167|ref|XP_004514335.1| chr0 3523859 3529684 +
2 domain predictions
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Lj0g3v0290759.1
n.a. PREDICTED: methionine aminopeptidase 1A-like [Cicer arietinum] gi|502168167|ref|XP_004514335.1| chr0 150938717 150944953 -
2 domain predictions
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Lj1g3v4764170.1
n.a. PREDICTED: carbon catabolite repressor protein 4 homolog 2-like [Glycine max] gi|356505479|ref|XP_003521518.1| chr1 57250042 57262942 -
2 domain predictions
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Lj5g3v0746910.1
n.a. PREDICTED: carbon catabolite repressor protein 4 homolog 2-like [Glycine max] gi|356530679|ref|XP_003533908.1| chr5 10864021 10871086 +
2 domain predictions
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LotjaGi1g1v0743500.1
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|I1JQF1|I1JQF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131705857 131712995 -
2 domain predictions
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LotjaGi1g1v0743500.2
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|V7CXW0|V7CXW0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131707283 131712481 -
2 domain predictions
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LotjaGi1g1v0743500.3
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|I1JQF1|I1JQF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131707283 131712481 -
2 domain predictions
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LotjaGi1g1v0743500.4
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58560.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q8W0Z9|CCR4A_ARATH Carbon catabolite repressor protein 4 homolog 1; TrEMBL-Plants: tr|I1JQF1|I1JQF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131707283 131712481 -
2 domain predictions
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LotjaGi1g1v0743500.5
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|V7CXW0|V7CXW0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131707283 131712481 -
2 domain predictions
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LotjaGi1g1v0743500.6
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|I1JQF1|I1JQF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131707283 131712481 -
2 domain predictions
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LotjaGi1g1v0743500.7
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|I1JQF1|I1JQF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131707296 131712481 -
2 domain predictions
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LotjaGi3g1v0436800.1
n.a. Methionine aminopeptidase; TAIR: AT2G45240.1 methionine aminopeptidase 1A; Swiss-Prot: sp|Q9SLN5|MAP1A_ARATH Methionine aminopeptidase 1A; TrEMBL-Plants: tr|V7AMJ4|V7AMJ4_PHAVU Methionine aminopeptidase; Found in the gene: LotjaGi3g1v0436800 LjG1.1_chr3 84803828 84811575 -
2 domain predictions
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LotjaGi5g1v0115900.1
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|I1L2J3|I1L2J3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0115900 LjG1.1_chr5 23615368 23624057 -
2 domain predictions
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LotjaGi5g1v0115900.2
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|I1L2J3|I1L2J3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0115900 LjG1.1_chr5 23618264 23623641 -
2 domain predictions
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