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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1003390 |
| Transcript ID | Lj5g3v1003390.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Centromere protein [Medicago truncatula] gi|357440635|ref|XP_003590595.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 52 | 52 | 7.10E-23 | ||
| ProSiteProfiles | 1 | 58 | 58 | 36.99 | ||
| PANTHER | 1 | 1287 | 1287 | 0 | – | |
| PANTHER | 1 | 1287 | 1287 | 0 | – | |
| MobiDBLite | 77 | 121 | 45 | – | – | |
| SUPERFAMILY | 179 | 372 | 194 | 3.92E-06 | – | |
| Coils | 182 | 265 | 84 | – | – | |
| Coils | 273 | 419 | 147 | – | – | |
| MobiDBLite | 282 | 301 | 20 | – | – | |
| SUPERFAMILY | 354 | 595 | 242 | 9.15E-07 | – | |
| Coils | 434 | 454 | 21 | – | – | |
| Coils | 539 | 587 | 49 | – | – | |
| Coils | 609 | 640 | 32 | – | – | |
| Coils | 654 | 674 | 21 | – | – | |
| Coils | 689 | 744 | 56 | – | – | |
| Coils | 759 | 786 | 28 | – | – | |
| Coils | 830 | 850 | 21 | – | – | |
| Coils | 1010 | 1065 | 56 | – | – | |
| Coils | 1129 | 1156 | 28 | – | – | |
| Coils | 1227 | 1275 | 49 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Actin binding | Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments. |
Expression pattern of Lj5g3v1003390.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1003390.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.