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Lj5g3v1047150.1

Overview

Field Value
Gene ID Lj5g3v1047150
Transcript ID Lj5g3v1047150.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: kinesin-related protein 8-like isoform X2 [Cicer arietinum] gi|502115100|ref|XP_004495124.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 19 19
ProSiteProfiles 1 29 29 6
PANTHER 5 191 187 0
PANTHER 5 191 187 0
TMHMM 20 42 23
Phobius 20 47 28
Phobius 48 843 796
PANTHER 207 843 637 0
PANTHER 207 843 637 0
MobiDBLite 396 433 38
MobiDBLite 445 515 71
Pfam 523 613 91 7.00E-33
Coils 535 580 46
Coils 592 619 28
Coils 784 804 21

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj5g3v1047150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1047150.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.