Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj5g3v1097050.1

Overview

Field Value
Gene ID Lj5g3v1097050
Transcript ID Lj5g3v1097050.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Glycine max] gi|356560807|ref|XP_003548678.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27002
1 209 209 4.10E-91 –
CDD
cd00028
1 85 85 3.95E-18 –
PANTHER
PTHR27002:SF157
1 209 209 4.10E-91 –
ProSiteProfiles
PS50927
1 82 82 19.039
IPR001480
SMART
SM00108
1 85 85 9.90E-11
IPR001480
Gene3D
G3DSA:2.90.10.10
2 89 88 4.90E-19
IPR001480
SUPERFAMILY
SSF51110
7 116 110 1.20E-27
IPR001480
Pfam
PF01453
10 113 104 1.00E-29
IPR001480
Pfam
PF00954
144 206 63 8.40E-08
IPR000858

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0048544
Biological process Recognition of pollen The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.
Subterm of
Part of

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj5g3v1097050.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1097050.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.