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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001480
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 160 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 5.474s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0042119.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502166655|ref|XP_004513948.1| chr0 13849269 13851390 -
3 domain predictions
 –
Lj0g3v0059499.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502166662|ref|XP_004513950.1| chr0 19683288 19688507 +
6 domain predictions
 –
Lj0g3v0059509.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356545297|ref|XP_003541080.1| chr0 19690149 19694423 +
6 domain predictions
 –
Lj0g3v0111979.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514897|ref|XP_003526138.1| chr0 48657855 48658450 -
4 domain predictions
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Lj0g3v0112879.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356530645|ref|XP_003533891.1| chr0 49267932 49271244 +
6 domain predictions
 –
Lj0g3v0112879.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X1 [Cicer arietinum] gi|502166659|ref|XP_004513949.1| chr0 49268904 49272257 +
6 domain predictions
 –
Lj0g3v0119349.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Glycine max] gi|356560807|ref|XP_003548678.1| chr0 52821221 52821844 +
6 domain predictions
 –
Lj0g3v0129129.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514945|ref|XP_003526162.1| chr0 58411938 58415932 -
6 domain predictions
 –
Lj0g3v0132429.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514903|ref|XP_003526141.1| chr0 60436549 60444443 +
6 domain predictions
 –
Lj0g3v0171409.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514935|ref|XP_003526157.1| chr0 82161320 82169128 -
3 domain predictions
 –
Lj0g3v0171409.2
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357474863|ref|XP_003607717.1| chr0 82167278 82169128 -
3 domain predictions
 –
Lj0g3v0175129.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357490189|ref|XP_003615382.1| chr0 84499031 84499906 -
6 domain predictions
 –
Lj0g3v0180729.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514935|ref|XP_003526157.1| chr0 87947647 87948726 +
5 domain predictions
 –
Lj0g3v0207799.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357458061|ref|XP_003599311.1| chr0 103912677 103912998 +
4 domain predictions
 –
Lj0g3v0211449.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Cicer arietinum] gi|502171796|ref|XP_004515104.1| chr0 106530167 106534430 +
5 domain predictions
 –
Lj0g3v0222299.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Cicer arietinum] gi|502088366|ref|XP_004488803.1| chr0 114346860 114347695 +
4 domain predictions
 –
Lj0g3v0247749.1
n.a. PREDICTED: PAN domain-containing protein At5g03700-like [Cicer arietinum] gi|502111715|ref|XP_004494144.1| chr0 128435286 128437794 +
6 domain predictions
 –
Lj0g3v0252549.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2-like [Cicer arietinum] gi|502157130|ref|XP_004510769.1| chr0 130962861 130966414 +
6 domain predictions
 –
Lj0g3v0257449.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Cicer arietinum] gi|502124903|ref|XP_004498719.1| chr0 133648660 133651802 -
6 domain predictions
 –
Lj0g3v0309109.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr0 161457127 161460340 +
6 domain predictions
 –
Lj0g3v0320629.1
n.a. n.a. chr0 167331017 167344608 -
6 domain predictions
 –
Lj0g3v0320639.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357474863|ref|XP_003607717.1| chr0 167331537 167332858 +
5 domain predictions
 –
Lj0g3v0320649.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357474863|ref|XP_003607717.1| chr0 167343050 167344851 +
6 domain predictions
 –
Lj0g3v0321369.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502083045|ref|XP_004487351.1| chr0 167812594 167813380 +
6 domain predictions
 –
Lj0g3v0321429.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502083045|ref|XP_004487351.1| chr0 167819044 167822055 +
6 domain predictions
 –
Lj0g3v0332939.1
n.a. Somatic embryogenesis receptor kinase [Medicago truncatula] gi|357458087|ref|XP_003599324.1| chr0 174230908 174233819 +
6 domain predictions
 –
Lj0g3v0348039.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Glycine max] gi|356517594|ref|XP_003527472.1| chr0 182652330 182655652 +
6 domain predictions
 –
Lj0g3v0354029.1
n.a. n.a. chr0 186433457 186441920 +
6 domain predictions
 –
Lj0g3v0355429.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502166655|ref|XP_004513948.1| chr0 187215457 187219003 +
3 domain predictions
 –
Lj0g3v0356909.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357452499|ref|XP_003596526.1| chr0 187941990 187942504 -
4 domain predictions
 –
Lj0g3v0358399.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357453577|ref|XP_003597066.1| chr0 188648804 188654509 -
6 domain predictions
 –
Lj1g3v1687840.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357465633|ref|XP_003603101.1| chr1 20084740 20087792 -
6 domain predictions
 –
Lj1g3v2445990.1
n.a. PREDICTED: PAN domain-containing protein At5g03700-like [Glycine max] gi|356566760|ref|XP_003551596.1| chr1 28559123 28561498 +
6 domain predictions
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Lj1g3v2611530.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Glycine max] gi|356524497|ref|XP_003530865.1| chr1 30273486 30276880 -
6 domain predictions
 –
Lj1g3v4275470.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1-like [Glycine max] gi|356504803|ref|XP_003521184.1| chr1 50298942 50302843 -
6 domain predictions
 –
Lj1g3v4485300.1
n.a. n.a. chr1 52814272 52815330 -
3 domain predictions
 –
Lj1g3v4696560.1
n.a. PREDICTED: PAN domain-containing protein At5g03700-like [Cicer arietinum] gi|502111715|ref|XP_004494144.1| chr1 55972032 55974012 +
4 domain predictions
 –
Lj2g3v1550250.3
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514866|ref|XP_003526123.1| chr2 24636503 24644430 -
6 domain predictions
 –
Lj2g3v1989170.1
n.a. Kinase-like protein [Medicago truncatula] gi|357482147|ref|XP_003611359.1| chr2 29778224 29780587 -
5 domain predictions
 –
Lj2g3v1989180.1
n.a. n.a. chr2 29783111 29786491 +
6 domain predictions
 –
Lj3g3v0065490.1
n.a. S-locus-specific glycoprotein S6 [Medicago truncatula] gi|357455241|ref|XP_003597901.1| chr3 638626 644174 +
6 domain predictions
 –
Lj3g3v0392830.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357515961|ref|XP_003628269.1| chr3 3171239 3176050 +
6 domain predictions
 –
Lj3g3v0392830.2
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357515961|ref|XP_003628269.1| chr3 3172546 3176050 +
6 domain predictions
 –
Lj3g3v0392840.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357515961|ref|XP_003628269.1| chr3 3178342 3181288 +
6 domain predictions
 –
Lj3g3v0685950.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514866|ref|XP_003526123.1| chr3 7565909 7570099 +
6 domain predictions
 –
Lj3g3v0686990.1
n.a. n.a. chr3 7584149 7588663 -
6 domain predictions
 –
Lj3g3v0697000.3
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr3 7593077 7595300 +
6 domain predictions
 –
Lj3g3v2887090.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514876|ref|XP_003526128.1| chr3 35626507 35627893 +
6 domain predictions
 –
Lj3g3v2887200.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502083036|ref|XP_004487349.1| chr3 35657651 35659094 -
2 domain predictions
 –
Lj3g3v2888260.1
n.a. n.a. chr3 35690440 35700132 -
6 domain predictions
 –