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Lj5g3v1341930.1

Overview

Field Value
Gene ID Lj5g3v1341930
Transcript ID Lj5g3v1341930.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS50011
1 256 256 43.849
IPR000719
SMART
SM00220
9 256 248 7.90E-75
IPR000719
Pfam
PF00069
12 256 245 5.80E-64
IPR000719
SUPERFAMILY
SSF56112
13 259 247 1.11E-79
IPR011009
Gene3D
G3DSA:3.30.200.20
13 109 97 4.60E-26 –
CDD
cd05117
14 255 242 1.28E-116 –
PANTHER
PTHR24349:SF76
14 263 250 6.00E-168 –
PANTHER
PTHR24349
14 263 250 6.00E-168 –
PIRSF
PIRSF000654
20 252 233 2.10E-21 –
Gene3D
G3DSA:1.10.510.10
110 257 148 4.50E-56 –
ProSitePatterns
PS00108
120 132 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj5g3v1341930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1341930.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.