Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj5g3v1412970.2

Overview

Field Value
Gene ID Lj5g3v1412970
Transcript ID Lj5g3v1412970.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor UNE12-like [Cicer arietinum] gi|502117932|ref|XP_004496017.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR16223
1 256 256 1.10E-148 –
PANTHER
PTHR16223:SF38
1 256 256 1.10E-148 –
MobiDBLite
mobidb-lite
65 190 126 – –
CDD
cd00083
184 240 57 2.43E-10 –
SUPERFAMILY
SSF47459
184 245 62 9.81E-15
IPR011598
ProSiteProfiles
PS50888
186 235 50 15.745
IPR011598
Gene3D
G3DSA:4.10.280.10
188 246 59 1.80E-14
IPR011598
Pfam
PF00010
191 235 45 3.50E-06
IPR011598
SMART
SM00353
192 241 50 2.80E-10
IPR011598
PANTHER
PTHR16223
276 342 67 1.10E-148 –
PANTHER
PTHR16223:SF38
276 342 67 1.10E-148 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj5g3v1412970.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1412970.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.