Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj5g3v1426510.1

Overview

Field Value
Gene ID Lj5g3v1426510
Transcript ID Lj5g3v1426510.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: kinesin-1-like [Glycine max] gi|356533623|ref|XP_003535361.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 43 43 – –
PANTHER
PTHR24115
6 463 458 3.70E-242
IPR027640
PANTHER
PTHR24115:SF528
6 463 458 3.70E-242 –
Coils
Coil
54 81 28 – –
Gene3D
G3DSA:3.40.850.10
93 429 337 1.50E-103
IPR001752
SMART
SM00129
93 428 336 1.90E-113
IPR001752
SUPERFAMILY
SSF52540
95 460 366 3.09E-100
IPR027417
ProSiteProfiles
PS50067
95 420 326 95.99
IPR001752
Pfam
PF00225
124 420 297 7.80E-93
IPR001752
PRINTS
PR00380
164 185 22 2.00E-34
IPR001752
PRINTS
PR00380
289 306 18 2.00E-34
IPR001752
PRINTS
PR00380
321 339 19 2.00E-34
IPR001752
PRINTS
PR00380
370 391 22 2.00E-34
IPR001752
Coils
Coil
416 465 50 – –
PANTHER
PTHR24115:SF528
619 632 14 3.70E-242 –
PANTHER
PTHR24115
619 632 14 3.70E-242
IPR027640

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003777
Molecular function Microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0007018
Biological process Microtubule-based movement A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
Subterm of
GO:0008017
Molecular function Microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
Subterm of

Genome browser

LORE1 insertions 55

Expression data

Expression pattern

Expression pattern of Lj5g3v1426510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1426510.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.