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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1427710 |
| Transcript ID | Lj5g3v1427710.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: WD repeat-containing protein 48-like [Cicer arietinum] gi|502117294|ref|XP_004495771.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 758 | 758 | 0 | – | |
| PANTHER | 1 | 758 | 758 | 0 | – | |
| MobiDBLite | 1 | 20 | 20 | – | – | |
| SMART | 19 | 68 | 50 | 2 | ||
| ProSiteProfiles | 31 | 339 | 309 | 37.149 | ||
| Gene3D | 33 | 375 | 343 | 6.00E-62 | ||
| CDD | 34 | 365 | 332 | 1.18E-50 | – | |
| SUPERFAMILY | 34 | 155 | 122 | 3.53E-62 | ||
| Pfam | 34 | 67 | 34 | 0.11 | ||
| SMART | 73 | 111 | 39 | 6.00E-04 | ||
| ProSitePatterns | 98 | 112 | 15 | – | ||
| PRINTS | 98 | 112 | 15 | 6.10E-06 | ||
| SMART | 115 | 155 | 41 | 3.40E-07 | ||
| Pfam | 116 | 155 | 40 | 0.002 | ||
| ProSiteProfiles | 122 | 164 | 43 | 10.475 | ||
| SMART | 207 | 246 | 40 | 5.80E-04 | ||
| SUPERFAMILY | 213 | 384 | 172 | 3.53E-62 | ||
| ProSiteProfiles | 214 | 255 | 42 | 14.719 | ||
| Pfam | 215 | 246 | 32 | 0.004 | ||
| PRINTS | 233 | 247 | 15 | 6.10E-06 | ||
| SMART | 249 | 288 | 40 | 2.50E-07 | ||
| Pfam | 252 | 288 | 37 | 1.50E-04 | ||
| ProSiteProfiles | 256 | 297 | 42 | 14.585 | ||
| ProSitePatterns | 275 | 289 | 15 | – | ||
| PRINTS | 275 | 289 | 15 | 6.10E-06 | ||
| SMART | 291 | 330 | 40 | 0.0018 | ||
| SUPERFAMILY | 415 | 452 | 38 | 3.53E-62 | ||
| Gene3D | 426 | 449 | 24 | 6.00E-62 | ||
| Pfam | 615 | 758 | 144 | 2.30E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v1427710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1427710.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.