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Lj5g3v1440060.2

Overview

Field Value
Gene ID Lj5g3v1440060
Transcript ID Lj5g3v1440060.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: histidine-containing phosphotransfer protein 1-like [Glycine max] gi|356576753|ref|XP_003556494.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR28242:SF8
1 149 149 1.70E-99 –
PANTHER
PTHR28242
1 149 149 1.70E-99 –
SUPERFAMILY
SSF47226
6 141 136 4.71E-38
IPR008207
Gene3D
G3DSA:1.20.120.160
19 138 120 1.30E-23
IPR008207
ProSiteProfiles
PS50894
40 145 106 15.869
IPR008207
CDD
cd00088
46 122 77 1.65E-09 –
Pfam
PF01627
46 128 83 2.90E-11
IPR008207
Coils
Coil
52 72 21 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000160
Biological process Phosphorelay signal transduction system A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj5g3v1440060.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1440060.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.