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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1598290 |
| Transcript ID | Lj5g3v1598290.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Heme binding [Theobroma cacao] gi|508703400|gb|EOX95296.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 1 | 364 | 364 | 3.80E-186 | – | |
| PANTHER | 1 | 364 | 364 | 3.80E-186 | – | |
| SignalP | 1 | 19 | 19 | – | – | |
| Phobius | 6 | 14 | 9 | – | – | |
| Phobius | 15 | 19 | 5 | – | – | |
| Phobius | 20 | 329 | 310 | – | – | |
| Pfam | 51 | 295 | 245 | 2.80E-25 | ||
| SMART | 51 | 295 | 245 | 6.50E-23 | ||
| CDD | 63 | 289 | 227 | 3.81E-06 | – | |
| TMHMM | 324 | 346 | 23 | – | – | |
| Phobius | 330 | 351 | 22 | – | – | |
| Phobius | 352 | 364 | 13 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. |
Expression pattern of Lj5g3v1598290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1598290.1, powered by CORGI.
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