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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1600770 |
| Transcript ID | Lj5g3v1600770.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Lipase [Medicago truncatula] gi|357442301|ref|XP_003591428.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 425 | 425 | – | – | |
| MobiDBLite | 26 | 46 | 21 | – | – | |
| PANTHER | 76 | 275 | 200 | 0 | – | |
| PANTHER | 76 | 275 | 200 | 0 | – | |
| MobiDBLite | 114 | 137 | 24 | – | – | |
| Gene3D | 175 | 199 | 25 | 1.80E-44 | ||
| MobiDBLite | 225 | 254 | 30 | – | – | |
| Gene3D | 233 | 234 | 2 | 1.80E-44 | ||
| MobiDBLite | 285 | 304 | 20 | – | – | |
| PANTHER | 320 | 694 | 375 | 0 | – | |
| PANTHER | 320 | 694 | 375 | 0 | – | |
| Gene3D | 330 | 541 | 212 | 1.80E-44 | ||
| CDD | 340 | 495 | 156 | 3.73E-24 | – | |
| SUPERFAMILY | 346 | 537 | 192 | 2.94E-25 | ||
| Pfam | 363 | 499 | 137 | 1.30E-25 | ||
| Phobius | 426 | 445 | 20 | – | – | |
| Phobius | 446 | 693 | 248 | – | – | |
| Coils | 617 | 637 | 21 | – | – | |
| Phobius | 694 | 715 | 22 | – | – | |
| TMHMM | 695 | 717 | 23 | – | – | |
| Phobius | 716 | 718 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of Lj5g3v1600770.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1600770.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.