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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1712580 |
| Transcript ID | Lj5g3v1712580.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein TOPLESS-like [Glycine max] gi|356526242|ref|XP_003531727.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 470 | 470 | 0 | – | |
| PANTHER | 1 | 470 | 470 | 0 | ||
| MobiDBLite | 23 | 55 | 33 | – | – | |
| SMART | 93 | 132 | 40 | 15 | ||
| SUPERFAMILY | 95 | 415 | 321 | 3.30E-40 | ||
| Gene3D | 106 | 416 | 311 | 8.20E-43 | ||
| SMART | 149 | 193 | 45 | 45 | ||
| ProSiteProfiles | 161 | 426 | 266 | 18.616 | ||
| SMART | 199 | 240 | 42 | 5.30E-06 | ||
| ProSiteProfiles | 206 | 249 | 44 | 10.876 | ||
| Pfam | 206 | 240 | 35 | 1.10E-05 | ||
| ProSitePatterns | 227 | 241 | 15 | – | ||
| SMART | 243 | 284 | 42 | 0.13 | ||
| SMART | 287 | 330 | 44 | 19 | ||
| SMART | 333 | 373 | 41 | 1.1 | ||
| ProSiteProfiles | 351 | 382 | 32 | 9.071 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj5g3v1712580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1712580.1, powered by CORGI.
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