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Lj5g3v1794730.1

Overview

Field Value
Gene ID Lj5g3v1794730
Transcript ID Lj5g3v1794730.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein MOR1-like [Glycine max] gi|356533943|ref|XP_003535517.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12609
1 662 662 5.00E-275 –
PANTHER
PTHR12609:SF0
1 662 662 5.00E-275 –
SMART
SM01349
1 234 234 5.60E-40 –
SUPERFAMILY
SSF48371
19 218 200 5.08E-34
IPR016024
Gene3D
G3DSA:1.25.10.10
19 214 196 4.30E-09
IPR011989
MobiDBLite
mobidb-lite
228 269 42 – –
SMART
SM01349
275 510 236 1.30E-63 –
Gene3D
G3DSA:1.25.10.10
281 488 208 9.90E-23
IPR011989
SUPERFAMILY
SSF48371
297 492 196 5.08E-34
IPR016024
Pfam
PF12348
299 477 179 2.50E-12
IPR024395
ProSiteProfiles
PS50077
447 485 39 12.428
IPR021133
MobiDBLite
mobidb-lite
500 531 32 – –
MobiDBLite
mobidb-lite
546 587 42 – –
SUPERFAMILY
SSF48371
594 628 35 5.08E-34
IPR016024

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 73

Expression data

Expression pattern

Expression pattern of Lj5g3v1794730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1794730.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.