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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1925220 |
| Transcript ID | Lj5g3v1925220.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peroxidase 12-like [Cicer arietinum] gi|502118925|ref|XP_004496443.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 19 | 19 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| PANTHER | 6 | 314 | 309 | 1.20E-204 | – | |
| PANTHER | 6 | 314 | 309 | 1.20E-204 | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| Phobius | 19 | 26 | 8 | – | – | |
| Phobius | 27 | 335 | 309 | – | – | |
| SUPERFAMILY | 34 | 313 | 280 | 1.31E-98 | ||
| ProSiteProfiles | 34 | 313 | 280 | 70.839 | ||
| CDD | 34 | 311 | 278 | 4.31E-160 | ||
| Gene3D | 35 | 204 | 170 | 8.30E-63 | – | |
| PRINTS | 44 | 63 | 20 | 1.30E-48 | ||
| Pfam | 52 | 276 | 225 | 2.00E-66 | ||
| ProSitePatterns | 66 | 77 | 12 | – | ||
| PRINTS | 66 | 80 | 15 | 1.00E-32 | ||
| PRINTS | 68 | 88 | 21 | 1.30E-48 | ||
| PRINTS | 109 | 122 | 14 | 1.30E-48 | ||
| PRINTS | 128 | 138 | 11 | 1.30E-48 | ||
| PRINTS | 129 | 146 | 18 | 1.00E-32 | ||
| PRINTS | 147 | 159 | 13 | 1.00E-32 | ||
| PRINTS | 147 | 162 | 16 | 1.30E-48 | ||
| ProSitePatterns | 196 | 206 | 11 | – | ||
| PRINTS | 196 | 211 | 16 | 1.00E-32 | ||
| Gene3D | 205 | 297 | 93 | 6.30E-06 | – | |
| PRINTS | 231 | 246 | 16 | 1.30E-48 | ||
| PRINTS | 233 | 248 | 16 | 1.00E-32 | ||
| PRINTS | 247 | 264 | 18 | 1.30E-48 | ||
| PRINTS | 287 | 300 | 14 | 1.30E-48 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj5g3v1925220.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1925220.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.