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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1927390 |
| Transcript ID | Lj5g3v1927390.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Palmitoyltransferase SWF1 [Medicago truncatula] gi|357443583|ref|XP_003592069.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | – | – | |
| PANTHER | 3 | 424 | 422 | 1.30E-271 | – | |
| PANTHER | 3 | 424 | 422 | 1.30E-271 | – | |
| TMHMM | 32 | 54 | 23 | – | – | |
| Phobius | 32 | 53 | 22 | – | – | |
| Phobius | 54 | 64 | 11 | – | – | |
| TMHMM | 64 | 86 | 23 | – | – | |
| Phobius | 65 | 85 | 21 | – | – | |
| Phobius | 86 | 182 | 97 | – | – | |
| ProSiteProfiles | 139 | 189 | 51 | 27.888 | ||
| Pfam | 139 | 263 | 125 | 2.60E-39 | ||
| Phobius | 183 | 206 | 24 | – | – | |
| TMHMM | 184 | 206 | 23 | – | – | |
| Phobius | 207 | 225 | 19 | – | – | |
| Phobius | 226 | 253 | 28 | – | – | |
| TMHMM | 229 | 251 | 23 | – | – | |
| Phobius | 254 | 425 | 172 | – | – | |
| MobiDBLite | 310 | 330 | 21 | – | – | |
| MobiDBLite | 353 | 396 | 44 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Palmitoyltransferase activity | Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule. |
Expression pattern of Lj5g3v1927390.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1927390.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.