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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1961190 |
| Transcript ID | Lj5g3v1961190.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter C family member 10-like [Cicer arietinum] gi|502119079|ref|XP_004496497.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 2 | 312 | 311 | 3.40E-195 | – | |
| PANTHER | 2 | 312 | 311 | 3.40E-195 | – | |
| Phobius | 6 | 25 | 20 | – | – | |
| Phobius | 26 | 134 | 109 | – | – | |
| Gene3D | 124 | 309 | 186 | 4.20E-12 | – | |
| SUPERFAMILY | 124 | 310 | 187 | 1.57E-19 | ||
| Phobius | 135 | 161 | 27 | – | – | |
| Pfam | 135 | 311 | 177 | 1.60E-13 | ||
| ProSiteProfiles | 136 | 312 | 177 | 20.493 | ||
| TMHMM | 139 | 161 | 23 | – | – | |
| Phobius | 162 | 172 | 11 | – | – | |
| Phobius | 173 | 190 | 18 | – | – | |
| Phobius | 191 | 266 | 76 | – | – | |
| TMHMM | 266 | 288 | 23 | – | – | |
| Phobius | 267 | 288 | 22 | – | – | |
| Phobius | 289 | 312 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v1961190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1961190.1, powered by CORGI.
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